WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00214324 Gene Name  Cjp-tftc-1
Sequence Name  ? CJA38477 Organism  Caenorhabditis japonica
Automated Description  Is an ortholog of C. elegans tftc-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA38477a.1 CJA38477a.1   [unknown]
Transcript:CJA38477b.1 CJA38477b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA38477b CJA38477b   [unknown]
CDS:CJA38477a CJA38477a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA23452, GAGGCGGCTGTTGGATACAAGTTTCAGGTATCTTGGCTATTTATAAGCGGTGGAGAACAA, WBGene00179024   Expr1087298 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA21233, GACAGTACCGCACGCGGCCGTTCACTGGTTTGTCAGACACTTTAGAAGATGCTCGGATTT, WBGene00176805   Expr1075944 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA08044, ATCGAAAACCGATTTTTTCAAATACGCCTTTCGAACCGCCATGAAGTTGTTGTTTGTGTA, WBGene00127248   Expr1092120 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA24409, CAAAGTACGATGGAGTGGAGCGCGGTTGGTTCATGATGCAAGATTTTCTGGCAGCAATGC, WBGene00179981   Expr1081575 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term