WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00136287 Gene Name  Cjp-rimb-1.2
Sequence Name  ? CJA17084 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin-like fold; RIMS-binding protein 1/2/3; SH3-like domain superfamily; Variant SH3 domain; SH3 domain; and Fibronectin type III superfamily. Is an ortholog of C. elegans rimb-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA17084b.1 CJA17084b.1   [unknown]
Transcript:CJA17084a.1 CJA17084a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17084b CJA17084b   [unknown]
CDS:CJA17084a CJA17084a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA02148, ATGAGCTATCAGCAACCATCCTATCCGAGCGTCGTGCAACAACAGCAAGCACAACCAGGT, WBGene00121352   Expr1086140 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-tag-168, CATGATTAGGAAAAGTGCTCCGGTACGGCAATCATCACAAACTTCAGCCGCTGCGCCAGC, WBGene00136287   Expr1089248 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term