WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00136700 Gene Name  Cjp-fhod-1
Sequence Name  ? CJA17496 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Formin, FH2 domain superfamily; Armadillo-type fold; Formin Homology 2 Domain; Formin, FH2 domain; and Armadillo-like helical. Is an ortholog of C. elegans fhod-1. In C. elegans, fhod-1 is involved in actin filament organization and embryonic body morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA17496b.1 CJA17496b.1   [unknown]
Transcript:CJA17496a.2 CJA17496a.2   [unknown]
Transcript:CJA17496a.1 CJA17496a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17496b CJA17496b   [unknown]
CDS:CJA17496a CJA17496a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-fhod-1, ATATTTGGATAATGAGATGACGTTGTCCGATCAGCAGGACGAGCTGGATATTCTTAAAGC, WBGene00128244   Expr1073934 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA28629, TCACAAAGGCCTATATATCACCGTTTCGTGAACAGCCAGCCCCACCCAAAAGTGGTCTTT, WBGene00184203   Expr1089355 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA17496, GGAAACGATTGGCAGAGAAGAGAGAGCGCAACAAGACACGTGGCAAGATATGGGCGTTGG, WBGene00136700   Expr1090418 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term