WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032366 Gene Name  Cbr-lst-6
Sequence Name  ? CBG11204 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: DENN domain, C-terminal lobe; dDENN domain; PLAT/LH2 domain superfamily; PLAT/LH2 domain; uDENN domain; cDENN domain; RUN domain; RUN domain superfamily; and DENN (AEX-3) domain. Is an ortholog of C. elegans lst-6. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG11204a.1 CBG11204a.1   [unknown]
Transcript:CBG11204b.1 CBG11204b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG11204a CBG11204a   [unknown]
CDS:CBG11204b CBG11204b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG11204, GAAAAGAAGCCGTCAATTGTGGTCATTTGGATCCAACATTTTCGGGCGTCGAGGAGAACA, WBGene00032366   Expr1058268 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term