WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00059411 Gene Name  Cre-sax-7
Sequence Name  ? CRE09979 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin subtype; Fibronectin type III; Immunoglobulin-like fold; Neurofascin/L1/NrCAM, C-terminal domain; Immunoglobulin domain; Immunoglobulin subtype 2; Fibronectin type III domain; Bravo-like intracellular region; Immunoglobulin-like domain superfamily; and Fibronectin type III superfamily. Is an ortholog of C. elegans sax-7. In C. elegans, sax-7 is involved in several processes, including cell development; establishment of mitotic spindle orientation; and regulation of cell morphogenesis. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE09979.1 CRE09979.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE09979 CRE09979   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE31657, CAAAGGCTGAATCAGAAACAGACAGTATGGCTCAATACGGAGACACGGATCCTGGTGTTT, WBGene00175040   Expr1100015 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cre-sax-7, GATTCGAATTACTGGATTGGAGAATGAGACACCGTACAGATTCATTTTGAGAGCTCATAC, WBGene00059411   Expr1107912 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term