WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00054871 Gene Name  CRE25178
Sequence Name  ? CRE25178 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. Is an ortholog of C. elegans T22G5.3 and hecw-1. In C. elegans, hecw-1 is involved in regulation of defense response to bacterium. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE25178.1 CRE25178.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE25178 CRE25178   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE25178, CACCAATTTACTAATGATGATCTCAATGCATTTATGAAACAATGGCTTGAGTCGACTTCC, WBGene00054871   Expr1100568 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term