WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00054258 Gene Name  Cre-farl-11
Sequence Name  ? CRE26178 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: N1221-like protein; Domain of unknown function (DUF3402); Far11/STRP; Far11/STRP, C-terminal; and Far11/STRP, N-terminal. Is an ortholog of C. elegans farl-11. In C. elegans, farl-11 is involved in endoplasmic reticulum organization; epithelial tube morphogenesis; and positive regulation of endocytic recycling. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE26178.1 CRE26178.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE26178 CRE26178   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-farl-11, TACTTGTGCACACTCGGTTCTCGGAGCAAATATTAACCTTGGACGCCAATTCAAGAAAGG, WBGene00054258   Expr1114689 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term