WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00178492 Gene Name  CJA22920
Sequence Name  ? CJA22920 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domain: Glycosyltransferase family 92. Is an ortholog of C. elegans Y47D3B.4. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA22920a.1 CJA22920a.1   [unknown]
Transcript:CJA22920c.1 CJA22920c.1   [unknown]
Transcript:CJA22920b.1 CJA22920b.1   [unknown]
Transcript:CJA22920d.1 CJA22920d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA22920c CJA22920c   [unknown]
CDS:CJA22920d CJA22920d   [unknown]
CDS:CJA22920a CJA22920a   [unknown]
CDS:CJA22920b CJA22920b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA22920, TCGAAAACGGTCAAAGAAAACAAGCCCAAATGGAGAGTACGGGAAAAGTTTCAGTAGGTA, WBGene00178492   Expr1086897 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA16175, AAACGACGACACGAACTTTTACCCTACAACGACTGTTTTTATCAACACATTCACACTCAT, WBGene00135379   Expr1077358 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term