WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00224198 Gene Name  Bma-add-1
Sequence Name  ? Bm3937 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: Class II Aldolase and Adducin N-terminal domain; Class II aldolase/adducin N-terminal; and Class II aldolase/adducin N-terminal domain superfamily. Is an ortholog of C. elegans add-1. In C. elegans, add-1 is involved in actin filament bundle organization; memory; and receptor localization to synapse. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm3937c.1 Bm3937c.1   [unknown]
Transcript:Bm3937a.1 Bm3937a.1   [unknown]
Transcript:Bm3937b.1 Bm3937b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm3937c Bm3937c   [unknown]
CDS:Bm3937a Bm3937a   [unknown]
CDS:Bm3937b Bm3937b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30
  Proteins secreted by B.malayi at L3 larva stage, according to LC-MS-MS. N.A. WBPaper00050454:Secretome_protein

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term