WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00137328 Gene Name  Cjp-ssu-2
Sequence Name  ? CJA18124 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domain: DOMON domain. Is an ortholog of C. elegans ssu-2. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA18124b.1 CJA18124b.1   [unknown]
Transcript:CJA18124a.1 CJA18124a.1   [unknown]
Transcript:CJA18124c.1 CJA18124c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA18124a CJA18124a   [unknown]
CDS:CJA18124b CJA18124b   [unknown]
CDS:CJA18124c CJA18124c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA07432, TGCGTTATCAGCAACATGGGAGAATTTGTCGGATATGAACCAGAAGTATATCTCTCGTAC, WBGene00126636   Expr1072015 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-ssu-2, ATTAAGGAATGCCATCAGTGTAAAGGAGGTGGCAAGAAACCGTGTACATCGTGCTCTGGA, WBGene00137328   Expr1082067 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07233, AACAGGCTTGTCTGCGAGTTCACCCAACAAGTTATGCCCCAGATTGACAACAAAAACGGG, WBGene00126437   Expr1091271 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term