WormMine: Gene WBGene00028301

• WormBase Gene ID: WBGene00028301
• Gene Name: CBG05945
• Sequence Name: CBG05945
• Organism: Caenorhabditis briggsae
• Automated Description: Is affected by Cbr-htz-1 based on RNA-seq studies. Is an ortholog of C. elegans F33D4.6.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG05945c.1	CBG05945c.1		[unknown]
Transcript:CBG05945a.1	CBG05945a.1		[unknown]
Transcript:CBG05945b.1	CBG05945b.1		[unknown]

Other

3 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG05945c	CBG05945c		[unknown]
CDS:CBG05945a	CBG05945a		[unknown]
CDS:CBG05945b	CBG05945b		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in Cbr-htz-1(gu167) comparing to in AF16.	DESeq2, FDR < 0.05.	WBPaper00059178:Cbr-htz-1(gu167)_downregulated

1 Expression Patterns

• Primary Identifier: Expr1052405
• Remark: CBG05945, CACTGTTGAGGAATTCGCCAAGGAACACTGCTATTTCATCGAAAACTACTATCCAGCTCT, WBGene00028301
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term