WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00061743 Gene Name  Cre-sel-2
Sequence Name  ? CRE20245 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Armadillo-type fold; Neurobeachin-like, DUF1088; Neurobeachin/BDCP, DUF4704 alpha solenoid region; Concanavalin A-like lectin/glucanases superfamily; Neurobeachin/BDCP, DUF4704; and Concanavalin A-like lectin/glucanase domain superfamily. Is an ortholog of C. elegans sel-2. In C. elegans, sel-2 is involved in several processes, including apical protein localization; negative regulation of Notch signaling pathway; and regulation of vulval development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE20245.1 CRE20245.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE20245 CRE20245   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-sel-2, AACCTGTGCTCCACTTCTAAGAGAAATGATGTCGGATTTCCGTGGTTACCTTCAAAAAAC, WBGene00061743   Expr1103213 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term