WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127628 Gene Name  CJA08425
Sequence Name  ? CJA08425 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: HORMA domain superfamily and Mitotic spindle checkpoint protein Mad2. Is an ortholog of C. elegans mdf-2. In C. elegans, mdf-2 is involved in embryo development; mitotic spindle assembly checkpoint signaling; and response to anoxia. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08425a.1 CJA08425a.1   [unknown]
Transcript:CJA08425b.1 CJA08425b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08425a CJA08425a   [unknown]
CDS:CJA08425b CJA08425b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-mdf-2, TCATTCTCCACGGCGGTCCACGGAGTTAACACTAATGTTCAGTACAAGGCTGATTTTTAA, WBGene00127628   Expr1077380 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term