WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127515 Gene Name  Cjp-kdin-1
Sequence Name  ? CJA08311 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: KAP family P-loop domain; Ankyrin repeat; Ankyrin repeats (many copies); Domain of unknown function DUF3447; Ankyrin repeat-containing domain superfamily; and Ankyrin repeats (3 copies). Is an ortholog of C. elegans kdin-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08311b.1 CJA08311b.1   [unknown]
Transcript:CJA08311a.1 CJA08311a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08311a CJA08311a   [unknown]
CDS:CJA08311b CJA08311b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-tag-144, TAGTACTTGCTACATGTCCATTGCCGGAATTGAAGGATAGCATGCAGGTACGGTCTAAAA, WBGene00127515   Expr1084825 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA26277, AAGAAATTGAAGAAGCGGCAGAAGCGGTGCTCTATTCAGAACGAGAACGGGCTCCGCTTC, WBGene00181849   Expr1082769 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term