WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00062238 Gene Name  Cre-nurf-1
Sequence Name  ? CRE24964 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Zinc finger, RING/FYVE/PHD-type; DDT domain; Zinc finger, FYVE/PHD-type; and Zinc finger, PHD-type. Is an ortholog of C. elegans nurf-1. In C. elegans, nurf-1 is involved in positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE24964a.1 CRE24964a.1   [unknown]
Transcript:CRE24964b.1 CRE24964b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE24964a CRE24964a   [unknown]
CDS:CRE24964b CRE24964b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-nurf-1, CTCTATTCATCACCAAATGCTATTCGTCATCGTGTCGTCGGATTCCCAACGTTCCCAACC, WBGene00062238   Expr1114006 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term