WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00062589 Gene Name  Cre-magi-1
Sequence Name  ? CRE12791 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: P-loop containing nucleoside triphosphate hydrolase; PDZ domain; WW domain; WW domain superfamily; Guanylate kinase/L-type calcium channel beta subunit; Guanylate kinase; and PDZ superfamily. Is an ortholog of C. elegans magi-1. In C. elegans, magi-1 is involved in habituation; long-term memory; and regulation of protein localization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE12791.1 CRE12791.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE12791 CRE12791   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-magi-1, AAAGGTTTCGGATTCTCAATTCGTGGAGGGCAAGAGTTTGGATCAATGCCACTGTTTGTT, WBGene00062589   Expr1113750 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term