WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00129221 Gene Name  Cjp-pis-1
Sequence Name  ? CJA10017 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: BRCA1 C Terminus (BRCT) domain; BRCT domain; and BRCT domain superfamily. Is an ortholog of C. elegans pis-1. In C. elegans, pis-1 is involved in programmed cell death. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA10017.1 CJA10017.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA10017 CJA10017   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA06523, TCACCAAACCAGCAACAAGTATCGTCACAACAACACACACCGTGTCCAACAGTTCCAGGG, WBGene00125727   Expr1091773 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA23843, GCAAAATCCGTCCGGATTTGTGATGCCCGAACAGCCTAGAATGTCGCAACAGCAGCAACA, WBGene00179415   Expr1086656 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-pis-1, GTCGAATCAGAACAGCCATTTATCATTGTGTCCTGCGAAAATGATGCTCGCTCATTGAGC, WBGene00129221   Expr1090563 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term