WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00061250 Gene Name  Cre-pigl-1
Sequence Name  ? CRE13998 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: GlcNAc-PI de-N-acetylase; Putative deacetylase LmbE-like domain superfamily; N-acetylglucosaminyl phosphatidylinositol deacetylase-related; and N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase. Is an ortholog of C. elegans pigl-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE13998.1 CRE13998.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE13998 CRE13998   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE13998, GCTCGATTCGATTCCTTTGTGGCGGAAGTATATTGGAATGAGCGATGCGTTATTCTCATT, WBGene00061250   Expr1112948 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CRE13999, CGATTGCCGCAAAGTGCGAATTCGCAGACTTTTGAGGAGTTTATTAAGAGTATTGAGACG, WBGene00081326   Expr1106378 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term