WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128241 Gene Name  Cjp-lin-7
Sequence Name  ? CJA09035 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: L27 domain superfamily; L27 domain; PDZ domain; Protein lin-7; L27 domain, C-terminal; and PDZ superfamily. Is an ortholog of C. elegans lin-7. In C. elegans, lin-7 is involved in several processes, including egg-laying behavior; positive regulation of vulval development; and protein localization to basolateral plasma membrane. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09035.1 CJA09035.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09035 CJA09035   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-lin-7, AACTTTTGGACGAAATGGAGCGCCGATTCGAGAGACAACGACTCCGATCCTCTCAACAAA, WBGene00128241   Expr1071200 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term