WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00033281 Gene Name  Cbr-frm-4
Sequence Name  ? CBG12316 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: FERM/acyl-CoA-binding protein superfamily; FERM N-terminal domain; Band 4.1 domain; FERM C-terminal PH-like domain; FERM, C-terminal PH-like domain; FERM, N-terminal; FERM superfamily, second domain; Ubiquitin-like domain superfamily; FERM central domain; and PH-like domain superfamily. Is an ortholog of C. elegans frm-4. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG12316f.1 CBG12316f.1   [unknown]
Transcript:CBG12316c.1 CBG12316c.1   [unknown]
Transcript:CBG12316d.1 CBG12316d.1   [unknown]
Transcript:CBG12316e.1 CBG12316e.1   [unknown]
Transcript:CBG12316a.1 CBG12316a.1   [unknown]
Transcript:CBG12316b.1 CBG12316b.1   [unknown]
 

Other

6 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG12316a CBG12316a   [unknown]
CDS:CBG12316b CBG12316b   [unknown]
CDS:CBG12316e CBG12316e   [unknown]
CDS:CBG12316f CBG12316f   [unknown]
CDS:CBG12316c CBG12316c   [unknown]
CDS:CBG12316d CBG12316d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-frm-4, ACGAACCAACTCGTCATTATGTAGTTGGACAGTACCGGAAGTATTTCGGGCCAAAAATCT, WBGene00033281   Expr1064906 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term