WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00065421 Gene Name  Cre-lin-10
Sequence Name  ? CRE20420 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: PDZ domain; Phosphotyrosine interaction domain (PTB/PID); PTB/PI domain; PDZ superfamily; and PH-like domain superfamily. Is an ortholog of C. elegans lin-10. In C. elegans, lin-10 is involved in several processes, including neuron-neuron synaptic transmission; positive regulation of backward locomotion; and protein localization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE20420.1 CRE20420.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE20420 CRE20420   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-lin-10, GAATCGCGGAACGAGGTGGAATCCGTGTGGGTCATCGAATCATCGAAATCAACGGGACGT, WBGene00065421   Expr1102190 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term