WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00068410 Gene Name  CRE16296
Sequence Name  ? CRE16296 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain; Fibrinogen beta and gamma chains, C-terminal globular domain; and Fibrinogen-like, C-terminal. Is an ortholog of C. elegans C49C8.5. In C. elegans, C49C8.5 is involved in innate immune response. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE16296.1 CRE16296.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE16296 CRE16296   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Proteins expressed in activated sperm fraction after C. remanei spermatids were activated in vitro. N.A WBPaper00054996:activated_sperm_CRE

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE16296, TCAAACTATTTACCCAGACGGTTCTAGTCCTGTTAACGTTTATTGTGACCAGAAATCAGC, WBGene00068410   Expr1100661 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term