WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00223122 Gene Name  Bma-unc-36
Sequence Name  ? Bm2861 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: von Willebrand factor, type A; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; and VWA N-terminal. Is an ortholog of C. elegans unc-36. In C. elegans, unc-36 is involved in several processes, including egg-laying behavior; nematode pharyngeal pumping; and serotonin receptor signaling pathway. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

7 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm2861g.1 Bm2861g.1   [unknown]
Transcript:Bm2861c.1 Bm2861c.1   [unknown]
Transcript:Bm2861d.1 Bm2861d.1   [unknown]
Transcript:Bm2861e.1 Bm2861e.1   [unknown]
Transcript:Bm2861f.1 Bm2861f.1   [unknown]
Transcript:Bm2861a.1 Bm2861a.1   [unknown]
Transcript:Bm2861b.1 Bm2861b.1   [unknown]
 

Other

7 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm2861d Bm2861d   [unknown]
CDS:Bm2861e Bm2861e   [unknown]
CDS:Bm2861f Bm2861f   [unknown]
CDS:Bm2861g Bm2861g   [unknown]
CDS:Bm2861a Bm2861a   [unknown]
CDS:Bm2861b Bm2861b   [unknown]
CDS:Bm2861c Bm2861c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

8 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30
  Transcripts that showed significantly lower expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Downregulated
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 42 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M42
  Transcripts that showed significantly higher expression in adult comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:Adult_vs_Micro_Upregulated
  Transcripts that showed significantly decreased expression in male B. malayi 30 days after infecting gerbils, comparing to L4 male B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M30_vs_L4
  Transcripts that showed significantly lower expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Downregulated
  Transcripts that showed significantly increased expression in female B. malayi 30 days after infecting gerbils, comparing to L4 female B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_F30_vs_L4

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term