WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00211496 Gene Name  Cjp-vms-1
Sequence Name  ? CJA35649 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: VLRF1/Vms1 and Bacteroidetes VLRF1 release factor. Is an ortholog of C. elegans vms-1. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA35649b.1 CJA35649b.1   [unknown]
Transcript:CJA35649a.1 CJA35649a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA35649b CJA35649b   [unknown]
CDS:CJA35649a CJA35649a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA29141, TGCGCCGCCTATCATCGTAACATCTTTTTCGAGGCAAATGCTGGAATTGAGCAAAGGGAT, WBGene00184715   Expr1087977 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term