WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00132590 Gene Name  Cjp-rpn-7
Sequence Name  ? CJA13386 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Winged helix DNA-binding domain superfamily; PCI domain; 26S Proteasome non-ATPase regulatory subunit 6; Proteasome component (PCI) domain; 26S proteasome subunit RPN7; and 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1. Is an ortholog of C. elegans rpn-7. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA13386.1 CJA13386.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA13386 CJA13386   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-rpn-7, CAACCTTCGGATCGTATGAGCTTATGACTTACGAGAATCTCATTCTTTACACCGTTATTA, WBGene00132590   Expr1079510 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term