WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00137909 Gene Name  Cjp-rbg-1
Sequence Name  ? CJA18705 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Rab3 GTPase-activating protein catalytic subunit and Rab3GAP catalytic subunit, conserved domain. Is an ortholog of C. elegans rbg-1. In C. elegans, rbg-1 is involved in amyloid fibril formation; autophagy; and positive regulation of autophagosome assembly. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA18705.1 CJA18705.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA18705 CJA18705   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-rbg-1, ACAAAACTGTTGCGAATATTTGGGAGAATTCCGGGTTGACTGAAACGGATTATATCGTCA, WBGene00137909   Expr1070844 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term