WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00078399 Gene Name  CRE03844
Sequence Name  ? CRE03844 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Lethal giant larvae homologue 2; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; Lethal(2) giant larvae protein; LLGL2; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans tom-1. In C. elegans, tom-1 is involved in several processes, including regulation of presynaptic dense core granule exocytosis; regulation of synaptic vesicle docking; and synaptic vesicle priming. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE03844.1 CRE03844.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE03844 CRE03844   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CRE03844, ATTATTCTGATTGTCCGTTGGATTTGATTGGTGCACTTACATTGGTTGGAACTAAACAAA, WBGene00078399   Expr1107585 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term