WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039925 Gene Name  Cbr-vha-19
Sequence Name  ? CBG21042 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: V-type proton ATPase subunit S1, luminal domain and V0 complex accessory subunit Ac45. Is an ortholog of C. elegans vha-19. In C. elegans, vha-19 is involved in intracellular water homeostasis; positive regulation of oocyte development; and positive regulation of protein targeting to membrane. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21042.1 CBG21042.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21042 CBG21042   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-vha-19, CAGACGATGGATCGATTCGACGATCCGAAACAGAAGCAAATTGTGATCAATGTTCGAGAA, WBGene00039925   Expr1056699 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term