WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00029331 Gene Name  Cbr-nol-6
Sequence Name  ? CBG07196 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Nrap protein PAP/OAS1-like domain 5; NOL6/Upt22; Nrap protein, domain 3; Nrap protein, domain 6; Nrap protein, domain 5; Nrap protein nucleotidyltransferase domain 4; Nrap protein, domain 4; Nrap protein, domain 2; Nrap protein PAP/OAS-like domain; Nrap protein domain 3; Nucleotidyltransferase superfamily; Nrap protein domain 1; and Nrap protein domain 6. Is an ortholog of C. elegans nol-6. In C. elegans, nol-6 is involved in negative regulation of innate immune response. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG07196.1 CBG07196.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG07196 CBG07196   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-nol-6, TATCGGAGTGATGTTCAAACCGCAAGAAGAAGAAGTCCCAGCGAAAATCTCTCGTTGCTC, WBGene00029331   Expr1063247 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term