WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039437 Gene Name  Cbr-crml-1
Sequence Name  ? CBG20460 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Leucine Rich repeat; CARMIL, pleckstrin homology domain; Leucine-rich repeat; Carmil pleckstrin homology domain; Leucine-rich repeat domain superfamily; and PH-like domain superfamily. Is an ortholog of C. elegans crml-1. In C. elegans, crml-1 is involved in several processes, including axon guidance; negative regulation of Rac protein signal transduction; and regulation of axon extension involved in axon guidance. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20460.1 CBG20460.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20460 CBG20460   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-crml-1, GACAGCCGAAGATGATGAGAATGCGAATAGTCGGCGATCGGTAGCTGATATGGCGAAAAT, WBGene00039437   Expr1054341 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term