WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035184 Gene Name  CBG14789
Sequence Name  ? CBG14789 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Immunoglobulin-like fold; Ankyrin repeat and fibronectin type-III domain-containing protein 1; and Fibronectin type III superfamily. Is an ortholog of C. elegans R07E4.1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14789c.1 CBG14789c.1   [unknown]
Transcript:CBG14789a.1 CBG14789a.1   [unknown]
Transcript:CBG14789b.1 CBG14789b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14789a CBG14789a   [unknown]
CDS:CBG14789b CBG14789b   [unknown]
CDS:CBG14789c CBG14789c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG14789, AGAAATCACACTGGCGGATAGTAATGAACTATGTCTGGTAGCAGCGATAGGTCAACGTGA, WBGene00035184   Expr1066912 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG14788, TGGAGTAAATGGAGAATCAAAACCAATGGTTTGTTGGCCAGGGAGAATTGAGATCACCAG, WBGene00035183   Expr1054093 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term