WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00103646 Gene Name  PPA14092
Sequence Name  ? PPA14092 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: Trypsin Inhibitor like cysteine rich domain; Serine protease inhibitor-like superfamily; Trypsin Inhibitor-like, cysteine rich domain; and Protein of unknown function DUF1182. Is an ortholog of C. elegans Y26D4A.12. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA14092.1 PPA14092.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA14092 PPA14092   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria infection: Xenorhabdus nematophila Pristionchus pacificus Genes with expression levels changed significantly after treatment of Xenorhabdus nematophila. Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets. WBPaper00041606:PP_X.nematophila_regulated
  Transcripts that showed significantly increased expression in Ppa-sul-2(tu1069) animals comparing to in wild type PS312 animals at 4M2 stage. DESeq244(version 1.18.1) with two criteria, P-value < 0.05 and Fold change > 2. WBPaper00064862:Ppa-sul-2(tu1069)_4M2_Up

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term