WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030446 Gene Name  CBG08699
Sequence Name  ? CBG08699 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Protein of unknown function DUF1096 and Protein of unknown function (DUF1096). Is an ortholog of C. elegans abu-7 and abu-8. In C. elegans, abu-7 is involved in pharynx development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG08699b.1 CBG08699b.1   [unknown]
Transcript:CBG08699a.1 CBG08699a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG08699a CBG08699a   [unknown]
CDS:CBG08699b CBG08699b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-abu-8, CAGATGTACAACCCATATAATAACAACAACCAGAACGCCAACTGCGCCCCAGCCTGCCAG, WBGene00030446   Expr1053702 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term