WormMine: Gene WBGene00025101

• WormBase Gene ID: WBGene00025101
• Gene Name: Cbr-cbs-1
• Sequence Name: CBG01937
• Organism: Caenorhabditis briggsae
• Automated Description: Is predicted to encode a protein with the following domains: Pyridoxal-phosphate dependent enzyme and Tryptophan synthase beta subunit-like PLP-dependent enzyme. Is an ortholog of C. elegans cbs-1. In C. elegans, cbs-1 is involved in sulfur compound biosynthetic process.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG01937.1	CBG01937.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG01937	CBG01937		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Heat shock: 34C 30min.	Transcripts that showed significantly increased expression in L2 larva stage C. briggsae animals after incubated in a 34C water bath for 30min.	DESeq2 v 1.18.1, fold change > 2, FDR < 0.01.	WBPaper00058955:heatshock_upregulated_CBG

2 Expression Patterns

• Primary Identifier: Expr1064893
• Remark: CBG01937, GCCAGGAACACTAGATACCAGTGCCATTGACTATTGGGCAAAGTCTCACGATAAGGAGTC, WBGene00025101
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1061454
• Remark: CBG27484, GAACCTTCCAGAGGATGCTAATGTTGTGGTACTTCTTCCGGATGGAATCAGAAACTATAT, WBGene00088898
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term