WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00032077 Gene Name  Cbr-fhod-1
Sequence Name  ? CBG10805 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Formin Homology 2 Domain; Formin, FH2 domain; Armadillo-type fold; Armadillo-like helical; and Formin, FH2 domain superfamily. Is an ortholog of C. elegans fhod-1. In C. elegans, fhod-1 is involved in actin filament organization and embryonic body morphogenesis. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG10805c.1 CBG10805c.1   [unknown]
Transcript:CBG10805d.1 CBG10805d.1   [unknown]
Transcript:CBG10805a.1 CBG10805a.1   [unknown]
Transcript:CBG10805b.1 CBG10805b.1   [unknown]
Transcript:CBG10805e.1 CBG10805e.1   [unknown]
 

Other

5 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG10805a CBG10805a   [unknown]
CDS:CBG10805b CBG10805b   [unknown]
CDS:CBG10805c CBG10805c   [unknown]
CDS:CBG10805d CBG10805d   [unknown]
CDS:CBG10805e CBG10805e   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-fhod-1, AAGGAATAAGACACGAGGAAAGATTTGGGCGCTGGAAGGAAGTTCAGATGGCGGGGCAGC, WBGene00032077   Expr1050912 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term