WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225430 Gene Name  Bma-ger-1
Sequence Name  ? Bm5169 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: NAD dependent epimerase/dehydratase family; NAD(P)-binding domain superfamily; and NAD-dependent epimerase/dehydratase. Is an ortholog of C. elegans ger-1. In C. elegans, ger-1 is involved in GDP-L-fucose biosynthetic process. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5169b.1 Bm5169b.1   [unknown]
Transcript:Bm5169a.2 Bm5169a.2   [unknown]
Transcript:Bm5169a.1 Bm5169a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5169b Bm5169b   [unknown]
CDS:Bm5169a Bm5169a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in adult comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:Adult_vs_Micro_Upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term