WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119506 Gene Name  Cjp-che-11
Sequence Name  ? CJA00302 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: WD40-repeat-containing domain superfamily and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans che-11. In C. elegans, che-11 is involved in several processes, including dauer entry; positive regulation of intracellular transport; and response to stress. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00302.1 CJA00302.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00302 CJA00302   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA00302, ATTGTACCGTGCACTCGACTGTTTGCACTTTTAATCGATGATTATGCGACGAAAAAGAAC, WBGene00119506   Expr1071743 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term