WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00177468 Gene Name  CJA21896
Sequence Name  ? CJA21896 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Ankyrin repeat-containing domain superfamily and Ankyrin repeat. Is an ortholog of C. elegans C18H2.5; F37A4.4; and lido-18. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA21896c.1 CJA21896c.1   [unknown]
Transcript:CJA21896b.1 CJA21896b.1   [unknown]
Transcript:CJA21896a.1 CJA21896a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA21896c CJA21896c   [unknown]
CDS:CJA21896b CJA21896b   [unknown]
CDS:CJA21896a CJA21896a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA21896, CAAGAGTTTCCAGTCTCTTCGTATCACATTTATATGGAGGATAGAACAGATGACGAGTTT, WBGene00177468   Expr1076534 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term