WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00133841 Gene Name  Cjp-toca-2
Sequence Name  ? CJA14637 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Fes/CIP4, and EFC/F-BAR homology domain; AH/BAR domain superfamily; SH3-like domain superfamily; SH3 domain; and FCH domain. Is an ortholog of C. elegans toca-2. In C. elegans, toca-2 is involved in several processes, including negative regulation of protein localization to adherens junction; positive regulation of egg-laying behavior; and regulation of cellular component organization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14637a.1 CJA14637a.1   [unknown]
Transcript:CJA14637b.1 CJA14637b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14637a CJA14637a   [unknown]
CDS:CJA14637b CJA14637b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-toca-2, AAAAAGAACCAAGAAATTGGCTTCGTGCCCACCTCGTACCTTCAATTCACAGCCATTCCC, WBGene00133841   Expr1090533 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term