WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035069 Gene Name  Cbr-mtm-5
Sequence Name  ? CBG14641 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: DENN domain, C-terminal lobe; Myotubularin-like phosphatase domain; Myotubularin family; GRAM domain; uDENN domain; Pleckstrin homology domain; PH domain; Protein-tyrosine phosphatase-like; cDENN domain; dDENN domain; PH-like domain superfamily; SBF1/SBF2 domain; Myotubularin protein; and DENN (AEX-3) domain. Is an ortholog of C. elegans mtm-5. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG14641.1 CBG14641.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14641 CBG14641   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-mtm-5, GTATCATCTAACAATCTCCCACCACTTTGTAGCGGATATTTGTCGAAACGAGGTGCCAAA, WBGene00035069   Expr1068896 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term