WormMine: Gene WBGene00024856

• WormBase Gene ID: WBGene00024856
• Gene Name: Cbr-col-99
• Sequence Name: CBG01652
• Organism: Caenorhabditis briggsae
• Automated Description: Is predicted to encode a protein with the following domains: Collagen triple helix repeat (20 copies) and Collagen triple helix repeat. Is an ortholog of C. elegans col-99. In C. elegans, col-99 is involved in axon guidance.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

12 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG01652d.1	CBG01652d.1		[unknown]
Transcript:CBG01652e.1	CBG01652e.1		[unknown]
Transcript:CBG01652f.1	CBG01652f.1		[unknown]
Transcript:CBG01652g.1	CBG01652g.1		[unknown]
Transcript:CBG01652a.1	CBG01652a.1		[unknown]
Transcript:CBG01652b.1	CBG01652b.1		[unknown]
Transcript:CBG01652c.1	CBG01652c.1		[unknown]
Transcript:CBG01652l.1	CBG01652l.1		[unknown]
Transcript:CBG01652h.1	CBG01652h.1		[unknown]
Transcript:CBG01652i.1	CBG01652i.1		[unknown]
Transcript:CBG01652j.1	CBG01652j.1		[unknown]
Transcript:CBG01652k.1	CBG01652k.1		[unknown]

Other

12 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG01652a	CBG01652a		[unknown]
CDS:CBG01652b	CBG01652b		[unknown]
CDS:CBG01652c	CBG01652c		[unknown]
CDS:CBG01652d	CBG01652d		[unknown]
CDS:CBG01652e	CBG01652e		[unknown]
CDS:CBG01652f	CBG01652f		[unknown]
CDS:CBG01652g	CBG01652g		[unknown]
CDS:CBG01652h	CBG01652h		[unknown]
CDS:CBG01652i	CBG01652i		[unknown]
CDS:CBG01652j	CBG01652j		[unknown]
CDS:CBG01652k	CBG01652k		[unknown]
CDS:CBG01652l	CBG01652l		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

• Primary Identifier: Expr1056581
• Remark: Cbr-col-99, GAGTACAAGGACCACCAGGAATACCAGGAGAGCCTGGAAGAACAATCATTGGACCGCAAG, WBGene00024856
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr1052701
• Remark: CBG26442, GCACAACAAACACGCATATCGACGCTTGAGAGACGCATCGATCAGCTTGCCGTTCAGGTA, WBGene00087856
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term