WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00220761 Gene Name  Bm500
Sequence Name  ? Bm500 Organism  Brugia malayi
Automated Description  Enriched in female based on proteomic studies. Is predicted to encode a protein with the following domains: Hs1/Cortactin; SH3 domain; SH3-like domain superfamily; and Repeat in HS1/Cortactin. Is an ortholog of O. volvulus OVOC10634. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm500.1 Bm500.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm500 Bm500   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Proteins that were enriched in female animals. Criteria used for protein identification included: two or more peptide matches, MASCOT score > 60, and P < 0.05. WBPaper00041323:female-associated

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term