WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00224256 Gene Name  Bm3995
Sequence Name  ? Bm3995 Organism  Brugia malayi
Automated Description  Is predicted to encode a protein with the following domains: Phosphatase 4 regulatory subunit 3; Domain of unknown function DUF625; Armadillo-type fold; and PH-like domain superfamily. Is an ortholog of O. volvulus OVOC6718. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm3995b.1 Bm3995b.1   [unknown]
Transcript:Bm3995c.1 Bm3995c.1   [unknown]
Transcript:Bm3995a.1 Bm3995a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm3995c Bm3995c   [unknown]
CDS:Bm3995a Bm3995a   [unknown]
CDS:Bm3995b Bm3995b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly increased expression in female B. malayi 30 days after infecting gerbils, comparing to L4 female B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_F30_vs_L4

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term