WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  When the sin-3 expression profile was examined in transgenic animals using a gfp reporter driven by a 1.5 kb sin-3 5'-flanking sequence, the sin-3::gfp signal was detected in all the ray structural cells. In addition, sin-3::gfp expression was observed in the inner labial neurons, socket cells, the cephalic neurons in the head region and the ventral nerve cord from L1 to adult stage. Primary Identifier  Expr4679
Remark  sin-3 = pqn-28 according to this paper.
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25 Anatomy Terms

Definition Name Synonym Primary Identifier
An interfacial epithelial cell which forms a distal cap on a sheath cell to bind the sheath of a sensillum to the neighboring hypodermis, via adherens junctions. There is often a narrow opening through the socket from the exterior into the sheath channel, allowing ciliated dendrites to be exposed to the external environment. The socket cell functions similarly to a glial cell. socket cell   WBbt:0005750
a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring. ventral nerve cord ventral cord WBbt:0005829
Cephalic neurons, contain dopamine CEPVL lineage name: ABplpaappppa WBbt:0004933
Cephalic neurons, contain dopamine CEPVR lineage name: ABprpaappppa WBbt:0004931
Cephalic neurons, contain dopamine CEPDL lineage name: ABplaaaaappa WBbt:0004938
Cephalic neurons, contain dopamine CEPDR lineage name: ABarpapaappa WBbt:0004937
neuron type, member of a set of 12 neurons of the inner labial sensilla. inner labial neuron IL neuron WBbt:0005117
Post-embryonic cell of pedigree V6L.papppapp, male sensory rays, structural cell. R3stL lineage name: V6L.papppapp WBbt:0004032
Post-embryonic cell of pedigree V6R.papppapp, male sensory rays, structural cell. R3stR lineage name: V6R.papppapp WBbt:0004031
Post-embryonic cell of pedigree V6L.pppapapp, male sensory rays, structural cell. R4stL lineage name: V6L.pppapapp WBbt:0004026
Post-embryonic cell of pedigree V6R.pppapapp, male sensory rays, structural cell. R4stR lineage name: V6R.pppapapp WBbt:0004025
Post-embryonic cell of pedigree V5L.pppppapp, male sensory rays, structural cell. R1stL lineage name: V5L.pppppapp WBbt:0004044
Post-embryonic cell of pedigree V5R.pppppapp, male sensory rays, structural cell. R1stR lineage name: V5R.pppppapp WBbt:0004043
Post-embryonic cell of pedigree V6L.papapapp, male sensory rays, structural cell. R2stL lineage name: V6L.papapapp WBbt:0004038
Post-embryonic cell of pedigree V6R.papapapp, male sensory rays, structural cell. R2stR lineage name: V6R.papapapp WBbt:0004037
Post-embryonic cell of pedigree TL.apappapp, male sensory rays, structural cell. R7stL lineage name: TL.apappapp WBbt:0003998
Male sensory rays, structural cell R7stR lineage name: TR.apappapp WBbt:0003996
Post-embryonic cell of pedigree TL.appapapp, male sensory rays, structural cell. R9stL lineage name: TL.appapapp WBbt:0003964
Male sensory rays, structural cell R9stR lineage name: TR.appapapp WBbt:0003962
Post-embryonic cell of pedigree TL.appaaapp, male sensory rays, structural cell. R8stL lineage name: TL.appaaapp WBbt:0003986
Post-embryonic cell of pedigree V6L.ppppaapp, male sensory rays, structural cell. R5stL lineage name: V6L.ppppaapp WBbt:0004020
Male sensory rays, structural cell R8stR lineage name: TR.appaaapp WBbt:0003972
Post-embryonic cell of pedigree V6R.ppppaapp, male sensory rays, structural cell. R5stR lineage name: V6R.ppppaapp WBbt:0004019
Post-embryonic cell of pedigree V6L.pppppapp, male sensory rays, structural cell. R6stL lineage name: V6L.pppppapp WBbt:0004010
Post-embryonic cell of pedigree V6R.pppppapp, male sensory rays, structural cell. R6stR lineage name: V6R.pppppapp WBbt:0004008

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004117 sin-3 F02E9.4 Caenorhabditis elegans

5 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035