WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The clp-4 reporter was active in neurons and co-localized with both the pan-neural unc-119::gfp and the GABAergic unc-47::gfp reporters. In addition, the clp-4 reporter was expressed in cells of the ventral and dorsal nerve cords. We next co-expressed the clp reporters with the body wall muscle marker myo-3p::gfp::nls and found that the clp-4 promoter was active in muscle. mRFP expressed from the clp-4 gene promoter also co-localized with a pes-6::gfp reporter, a marker for the excretory cell, which serves as the renal system of the worm. The expression pattern remained unchanged over the course of larval development through to adulthood. Primary Identifier  Expr10018
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring. ventral nerve cord ventral cord WBbt:0005829
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679
H-shaped cell associated with the excretory system, largest cell in C. elegans. excretory cell excretory canal cell WBbt:0005812
a bundle of nerve processes that runs along the dorsal mid-line of the animal. dorsal nerve cord dorsal cord WBbt:0006750
neuron that uses GABA as a vesicular neurotransmitter. GABAergic neuron   WBbt:0005190

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000545 clp-4 Y39A3CL.5 Caenorhabditis elegans

5 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035