WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The lin-11-int3p::GFP (pGLC59) transgenic lines that contain the entire intron 3 sequence showed GFP reporter expression in seven neurons at the larval stage L4. These include two sensory neurons (ADL and ADF), four interneurons (AVJ, RIC, AIZ, and RIF) and one pioneer interneuron (AVG). Expression was also detected in embryos. Because some of the lin-11 neurons are specified in the embryo, lin-11::GFP was expected to be expressed in these neurons during their specification. Consistent with this, GFP fluorescence was observed as early as in the pre-gastrula stage in the presumptive head and tail regions. By the 3-fold embryonic stage, fluorescence could be seen in neuronal cells in the anterior region. GFP fluorescence in ADL, ADF and AVJ was very strong and observed in almost all animals. Fluorescence was less frequently observed in RIC and AIZ and was rarely seen in RIF and AVG. Primary Identifier  Expr14671

16 Anatomy Terms

Definition Name Synonym Primary Identifier
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679
posterior region, from rectum to the end tail   WBbt:0005741
Amphid neuron, prob. chemosensory ADFL lineage name: ABalpppppaa WBbt:0004003
Amphid neuron, prob. chemosensory ADFR lineage name: ABpraaappaa WBbt:0003999
Amphid neuron, prob. chemosensory ADLL lineage name: ABalppppaad WBbt:0003997
Amphid neuron, prob. chemosensory ADLR lineage name: ABpraaapaad WBbt:0003995
Ring interneuron RICL lineage name: ABplppaaaapp WBbt:0003941
Ring interneuron RICR lineage name: ABprppaaaapp WBbt:0003940
Amphid interneuron AIZL lineage name: ABplapaaapav WBbt:0003959
Amphid interneuron AIZR lineage name: ABprapaaapav WBbt:0003957
anterior-most body region containing the pharynx. head   WBbt:0005739
Neuron class of one ventral cord interneuron, few synapses. AVG lineage name: ABprpapppap WBbt:0003850
Neuron, synapses like AVHL/R AVJR lineage name: ABalapppppa WBbt:0003846
Neuron, synapses like AVHL/R AVJL lineage name: ABalapapppa WBbt:0003847
Ring interneuron RIFR lineage name: ABprppapaaap WBbt:0003934
Ring interneuron RIFL lineage name: ABplppapaaap WBbt:0003936

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003000 lin-11 ZC247.3 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage. 3-fold embryo Ce WBls:0000020