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Intermine data mining platform for C. elegans and related nematodes

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Expression Pattern :

Pattern  unc-103::GFP construct expressed broadly in the head and ventral cord neurons in both males and hermaphrodites. In the male tail the SPC motor neurons and the PCB postcloacal sensory neurons expressed the construct. Many neurons express the construct, but because of variability in cell position and cellular localization of the fusion protein in processes, the list of unc-103-expressing cells is far from complete. In the head region ALA, ADL, ASK, AVH, AVJ, AIN, AVA, ASJ, SMDD, SIA, ADE, and AVD express the construct. In the tail region PHA, DVC, ALN, and PVP express the construct. The unc-103 fusion protein accumulates extensively in the processes of many ventral cord neurons; however, only some cells in the AS class of excitatory neurons was identified. In the adult hermaphrodite HSN expresses the unc-103::gfp construct. Primary Identifier  Expr2455
Subcellular Localization  The fusion protein aggregates mostly on the cytoplasmic membrane of neuronal processes and in many, but not all, cases of cell bodies. In larval hermaphrodites and males some of the cells had cell body localization of UNC-103::GFP.

38 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNL lineage name: ABplapppappa WBbt:0004758
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNR lineage name: ABprapppappa WBbt:0004757
Amphid neuron, prob. chemosensory ADLL lineage name: ABalppppaad WBbt:0003997
Amphid neuron, prob. chemosensory ADLR lineage name: ABpraaapaad WBbt:0003995
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKL lineage name: ABalpppapppa WBbt:0003884
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKR lineage name: ABpraaaapppa WBbt:0003883
Phasmid neurons, probably chemosensory PHAL lineage name: ABplpppaapp WBbt:0004366
Phasmid neurons, probably chemosensory PHAR lineage name: ABprpppaapp WBbt:0004365
Neuron class of one neuron, sends processes laterally and along dorsal cord. ALA lineage name: ABalapppaaa WBbt:0003955
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDDR lineage name: ABprpapaaaa WBbt:0004971
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDDL lineage name: ABplpapaaaa WBbt:0004972
Anterior deirid, sensory neuron, dopaminergic ADEL lineage name: ABplapaaaapa WBbt:0004009
Anterior deirid, sensory neuron, dopaminergic ADER lineage name: ABprapaaaapa WBbt:0004007
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAL lineage name: ABalppaaapa WBbt:0003870
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAR lineage name: ABalaappapa WBbt:0003869
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIAVR lineage name: ABprpapappa WBbt:0004983
Receives a few synapses in the ring, has a posteriorly directed process that runs sublaterally SIADL lineage name: ABplpapaapa WBbt:0004989
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASJL lineage name: ABalpppppppa WBbt:0003886
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASJR lineage name: ABpraaappppa WBbt:0003885
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPL lineage name: ABplppppaaa WBbt:0004082
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPR lineage name: ABprppppaaa WBbt:0004078
Neuron class of one ring interneuron, cell body in dorsorectal ganglion. DVC lineage name: Caapaa WBbt:0004821
Neuron associated with ALM ALNL lineage name: ABplapappppap WBbt:0003939
Neuron associated with ALM ALNR lineage name: ABprapappppap WBbt:0003937
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDL lineage name: ABalaaapalr WBbt:0003866
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDR lineage name: ABalaaapprl WBbt:0003865
Neuron, synapses like AVHL/R AVJR lineage name: ABalapppppa WBbt:0003846
Neuron, mainly postsynaptic in ventral cord and presynaptic in the ring AVHR lineage name: ABalappapaa WBbt:0003848
Neuron, synapses like AVHL/R AVJL lineage name: ABalapapppa WBbt:0003847

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans

7 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057