WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expressed in early embryos. The staining in the embryos was specific because it was largely reduced in syn-4(RNAi) embryos compared with wild-type embryos. In L1-stage larvae, prominent staining was detected in two rows of cells, which appeared to be the cuticle-secreting seam cells. In the adult hermaphrodite, Syn-4 was largely confined to the gonad. Primary Identifier  Expr2735
Subcellular Localization  An identical pattern of gonadal staining was observed in an adult expressing a GFP::Syn-4 fusion construct. Syn-4 was present in the outer membrane of early embryos. During cytokinesis, Syn-4 staining was observed in furrows that had just begun to ingress and as the membrane invaginated, the extent of Syn-4 staining expanded. Syn-4 remained associated with the membranes that separate blastomeres. The punctate staining pattern observed in the cytoplasm of early embryos probably reflects vesicular structures, which were often enriched around the forming nuclei. In the adult hermaphrodite, Syn-4 was largely confined to the gonad, where it localized to the incomplete membranous structures that separate the germ cell nuclei.

2 Anatomy Terms

Definition Name Synonym Primary Identifier
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
organ producing either sperm or ova. gonad   WBbt:0005175

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006374 syx-4 T01B11.3 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The C. elegans life stage spanning 0-100min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 28 cells. From first cleavage until the start of gastrulation. blastula embryo Ce WBls:0000005
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057