WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression from the transgene is ubiquitous in somatic tissues including hypodermis, muscles, neurons, pharynx, gut, excretory canal, somatic gonad, vulva and presumably all cells. However, even using complex arrays to help prevent transgene silencing in the germline, no CLK-2::GFP expression could be detected in the germline. Primary Identifier  Expr1677
Subcellular Localization  A full-length CLK-2::GFP fusion protein that complements the mutant phenotype for development, behavior and viability at 25C, is localized virtually exclusively to the cytoplasm. The pattern is unlikely to be a consequence of overexpression as very small transgene concentrations was used in complex arrays. However, although the nucleus appears dark in the fluorescent images, it is still possible that it contains very small amounts of the fusion protein.

4 Anatomy Terms

Definition Name Synonym Primary Identifier
somatic cell that situates at the tip of a gonad arm. distal tip cell DTC WBbt:0006865
a cellular object that consists of subcellular components, expresses genes or functions. Cell Cell type WBbt:0004017
ganglion in the head. head ganglion   WBbt:0005135
neuron with cell body in the preanal ganglion. preanal ganglion neuron preanal ganglion neurons WBbt:0005447

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000537 clk-2 C07H6.6 Caenorhabditis elegans

0 Life Stages