WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  Strongyloides infective stage L3 larval stage. This stage can develop as a part of a free-living life-cycle, or from a parasitic, parthenogenic female stage. Primary Identifier  WBls:0000680
Public Name  Strongyloides infective L3

0 Anatomy Terms

1 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The third stage larva of nematodes. L3 larval stage WBls:0000108

4 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
parasitic vs free-living. Transcripts that showed significantly increased expression at infective third-stage larva stage, comparing to free living female stage. Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. WBPaper00050919:up_infective-L3_vs_free-living_mRNA
parasitic vs free-living. Transcripts that showed significantly decreased expression at infective third-stage larva stage, comparing to parasitic female stage (collected from S. ratti-infected rats). Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. WBPaper00050919:down_infective-L3_vs_parasitic_mRNA
parasitic vs free-living. Transcripts that showed significantly increased expression at infective third-stage larva stage, comparing to parasitic female stage (collected from S. ratti-infected rats). Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
parasitic vs free-living. Transcripts that showed significantly decreased expression at infective third-stage larva stage, comparing to free living female stage. Differentially expressed genes in all pairwise comparisons (parasitic vs. free-living; parasitic vs. iL3; and iL3 vs. free-living) were determined for S.ratti and S.stercoralis using the R (version 3.1.2) package edgeR version 3.6.8. Genes with less than one count per million reads were excluded. Genes were considered to be differentially expressed if the false discovery rate (FDR) was <= 0.001 and the fold change was >= 2. WBPaper00050919:down_infective-L3_vs_free-living_mRNA

0 Expression Patterns

0 Followed By

0 Preceded By

1 Sub Stages

Remark Definition Other Name Public Name Primary Identifier
  Strongyloides infective L3 stage that develops from a parasitic adult female as part of a parasitic life-cycle. Strongyloides post parasitic L3 WBls:0000795